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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04080Hypothetical protein; KEGG: eci:UTI89_C3087 2.3e-86 hycB; formate hydrogenlyase subunit 2; COG: COG1142 Fe-S-cluster-containing hydrogenase components 2; Psort location: Cytoplasmic, score:8.96. (170 aa)    
Predicted Functional Partners:
CKO_04076
Hypothetical protein; KEGG: eci:UTI89_C3084 0. hycE; formate hydrogenlyase subunit 5 precursor; COG: COG3261 Ni,Fe-hydrogenase III large subunit; Psort location: Cytoplasmic, score:8.96.
 
 
 0.994
CKO_04074
Hypothetical protein; KEGG: eci:UTI89_C3082 1.6e-131 hycG; formate hydrogenlyase subunit 7; COG: COG3260 Ni,Fe-hydrogenase III small subunit; Psort location: Cytoplasmic, score:8.96.
 
 
 0.980
CKO_04075
Hypothetical protein; KEGG: eci:UTI89_C3083 8.9e-92 hycF; formate hydrogenlyase subunit 6; COG: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); Psort location: Cytoplasmic, score:8.96.
 
 
 0.980
CKO_04077
Hypothetical protein; KEGG: eci:UTI89_C3085 8.3e-144 hycD; membrane-spanning protein of formate hydrogenase; COG: COG0650 Formate hydrogenlyase subunit 4; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.973
CKO_04078
Hypothetical protein; KEGG: eci:UTI89_C3086 8.8e-291 hycC; formate hydrogenlyase subunit 3; COG: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.969
CKO_04073
Hypothetical protein; KEGG: eci:UTI89_C3081 2.6e-60 hycH; formate hydrogenlyase maturation protein HycH; COG: NOG09848 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
  
 0.946
CKO_04072
Hypothetical protein; KEGG: sec:SC2778 1.2e-64 hycI, hycE; protease involved in processing C-terminal end of HycE K08315; COG: COG0680 Ni,Fe-hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96.
 
  
 0.901
CKO_04081
Hypothetical protein; COG: NOG08679 non supervised orthologous group.
  
  
 0.871
CKO_01821
Hypothetical protein; KEGG: eca:ECA1250 0. fdhF; formate dehydrogenase H K00123; COG: COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Psort location: Periplasmic, score:9.44; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.850
CKO_03803
Hypothetical protein; KEGG: ecj:JW4040 4.1e-300 fdhF; formate dehydrogenase-H, selenopolypeptide subunit K00123; COG: COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.845
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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