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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04081Hypothetical protein; COG: NOG08679 non supervised orthologous group. (153 aa)    
Predicted Functional Partners:
CKO_04076
Hypothetical protein; KEGG: eci:UTI89_C3084 0. hycE; formate hydrogenlyase subunit 5 precursor; COG: COG3261 Ni,Fe-hydrogenase III large subunit; Psort location: Cytoplasmic, score:8.96.
  
  
 0.903
CKO_04080
Hypothetical protein; KEGG: eci:UTI89_C3087 2.3e-86 hycB; formate hydrogenlyase subunit 2; COG: COG1142 Fe-S-cluster-containing hydrogenase components 2; Psort location: Cytoplasmic, score:8.96.
  
  
 0.871
hypA
Hypothetical protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
  
 0.633
CKO_04075
Hypothetical protein; KEGG: eci:UTI89_C3083 8.9e-92 hycF; formate hydrogenlyase subunit 6; COG: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); Psort location: Cytoplasmic, score:8.96.
  
    0.457
CKO_04087
Hypothetical protein; KEGG: eci:UTI89_C3094 0. fhlA; formate hydrogenlyase transcriptional activator K01768; COG: COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains.
     
 0.450
CKO_04083
Hypothetical protein; KEGG: reh:H16_A1087 9.9e-14 ureG; UreA amidohydrolase (urease) regulatory and maturation protein UreG; COG: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; Psort location: Cytoplasmic, score:9.97.
  
    0.446
CKO_04085
Hypothetical protein; COG: COG0409 Hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96; Belongs to the HypD family.
       0.430
CKO_04086
Hypothetical protein; KEGG: cch:Cag_0556 2.2e-79 hypE; hydrogenase expression/formation protein HypE K04655; COG: COG0309 Hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96.
     
 0.430
CKO_04077
Hypothetical protein; KEGG: eci:UTI89_C3085 8.3e-144 hycD; membrane-spanning protein of formate hydrogenase; COG: COG0650 Formate hydrogenlyase subunit 4; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.429
CKO_04084
Hypothetical protein; COG: COG0298 Hydrogenase maturation factor.
       0.425
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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