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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04089Hypothetical protein; COG: NOG16835 non supervised orthologous group. (122 aa)    
Predicted Functional Partners:
rnhB
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
    0.613
CKO_04090
Hypothetical protein; COG: COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Psort location: CytoplasmicMembrane, score:8.60; Belongs to the bacterial solute-binding protein 9 family.
       0.524
CKO_04091
Hypothetical protein; KEGG: rru:Rru_A2894 6.0e-86 ABC transporter component K02074; COG: COG1121 ABC-type Mn/Zn transport systems, ATPase component; Psort location: Cytoplasmic, score:9.12.
       0.524
CKO_04092
Hypothetical protein; COG: COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
       0.524
CKO_04093
Hypothetical protein; COG: COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
       0.524
CKO_01041
Hypothetical protein; COG: NOG14112 non supervised orthologous group.
  
     0.490
CKO_02557
Hypothetical protein; KEGG: eci:UTI89_C2238 1.5e-146 ibrA; hypothetical protein YbdN K00390; COG: COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase.
  
     0.414
CKO_01186
COG: COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance.
  
   
 0.404
CKO_01466
Hypothetical protein; COG: COG1275 Tellurite resistance protein and related permeases; Psort location: CytoplasmicMembrane, score:10.00.
  
   
 0.400
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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