node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKO_00500 | CKO_00588 | CKO_00500 | CKO_00588 | COG: COG3092 Uncharacterized protein conserved in bacteria. | COG: COG3081 Nucleoid-associated protein; Psort location: Cytoplasmic, score:8.96. | 0.719 |
CKO_00500 | CKO_01969 | CKO_00500 | CKO_01969 | COG: COG3092 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG: COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; Psort location: Cytoplasmic, score:8.96. | 0.510 |
CKO_00500 | rlmM | CKO_00500 | CKO_04169 | COG: COG3092 Uncharacterized protein conserved in bacteria. | Hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.414 |
CKO_00500 | yihI | CKO_00500 | CKO_03146 | COG: COG3092 Uncharacterized protein conserved in bacteria. | Hypothetical protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family. | 0.783 |
CKO_00588 | CKO_00500 | CKO_00588 | CKO_00500 | COG: COG3081 Nucleoid-associated protein; Psort location: Cytoplasmic, score:8.96. | COG: COG3092 Uncharacterized protein conserved in bacteria. | 0.719 |
CKO_00588 | CKO_01969 | CKO_00588 | CKO_01969 | COG: COG3081 Nucleoid-associated protein; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; COG: COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; Psort location: Cytoplasmic, score:8.96. | 0.452 |
CKO_00588 | rlmM | CKO_00588 | CKO_04169 | COG: COG3081 Nucleoid-associated protein; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.649 |
CKO_00588 | yihI | CKO_00588 | CKO_03146 | COG: COG3081 Nucleoid-associated protein; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family. | 0.738 |
CKO_01722 | rlmM | CKO_01722 | CKO_04169 | Hypothetical protein; KEGG: eci:UTI89_C1879 0. ydiJ; hypothetical protein YdiJ; COG: COG0247 Fe-S oxidoreductase; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.504 |
CKO_01969 | CKO_00500 | CKO_01969 | CKO_00500 | Hypothetical protein; COG: COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; Psort location: Cytoplasmic, score:8.96. | COG: COG3092 Uncharacterized protein conserved in bacteria. | 0.510 |
CKO_01969 | CKO_00588 | CKO_01969 | CKO_00588 | Hypothetical protein; COG: COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; Psort location: Cytoplasmic, score:8.96. | COG: COG3081 Nucleoid-associated protein; Psort location: Cytoplasmic, score:8.96. | 0.452 |
CKO_01969 | CKO_04657 | CKO_01969 | CKO_04657 | Hypothetical protein; COG: COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.429 |
CKO_01969 | nfuA | CKO_01969 | CKO_04835 | Hypothetical protein; COG: COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.508 |
CKO_01969 | rlmM | CKO_01969 | CKO_04169 | Hypothetical protein; COG: COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.461 |
CKO_01969 | yihI | CKO_01969 | CKO_03146 | Hypothetical protein; COG: COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family. | 0.454 |
CKO_04170 | CKO_04171 | CKO_04170 | CKO_04171 | Hypothetical protein; COG: COG2363 Uncharacterized small membrane protein; Psort location: CytoplasmicMembrane, score:9.46. | Hypothetical protein; KEGG: shn:Shewana3_3435 3.9e-08 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family. | 0.923 |
CKO_04170 | CKO_04175 | CKO_04170 | CKO_04175 | Hypothetical protein; COG: COG2363 Uncharacterized small membrane protein; Psort location: CytoplasmicMembrane, score:9.46. | Hypothetical protein; KEGG: cps:CPS_2211 2.2e-15 putative selenocysteine lyase K02426; COG: COG2166 SufE protein probably involved in Fe-S center assembly. | 0.670 |
CKO_04170 | rlmM | CKO_04170 | CKO_04169 | Hypothetical protein; COG: COG2363 Uncharacterized small membrane protein; Psort location: CytoplasmicMembrane, score:9.46. | Hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.925 |
CKO_04171 | CKO_04170 | CKO_04171 | CKO_04170 | Hypothetical protein; KEGG: shn:Shewana3_3435 3.9e-08 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein; COG: COG2363 Uncharacterized small membrane protein; Psort location: CytoplasmicMembrane, score:9.46. | 0.923 |
CKO_04171 | CKO_04175 | CKO_04171 | CKO_04175 | Hypothetical protein; KEGG: shn:Shewana3_3435 3.9e-08 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein; KEGG: cps:CPS_2211 2.2e-15 putative selenocysteine lyase K02426; COG: COG2166 SufE protein probably involved in Fe-S center assembly. | 0.528 |