STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04247Hypothetical protein; COG: COG1556 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96. (231 aa)    
Predicted Functional Partners:
CKO_04246
Hypothetical protein; KEGG: eci:UTI89_C0330 6.3e-249 ykgF; putative electron transport protein YkgF K08263; COG: COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain; Psort location: Cytoplasmic, score:8.96.
 
 
 0.996
CKO_04245
Hypothetical protein; KEGG: eci:UTI89_C0329 1.6e-110 ykgE; hypothetical protein YkgE K00104; COG: COG0247 Fe-S oxidoreductase; Psort location: Cytoplasmic, score:8.96.
 
 
 0.994
CKO_00534
Hypothetical protein; KEGG: stm:STM2286 1.6e-211 glpC; sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit K00113; COG: COG0247 Fe-S oxidoreductase.
 
 
 0.899
CKO_00497
Hypothetical protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.890
CKO_01722
Hypothetical protein; KEGG: eci:UTI89_C1879 0. ydiJ; hypothetical protein YdiJ; COG: COG0247 Fe-S oxidoreductase; Psort location: Cytoplasmic, score:8.96.
  
 
 0.850
CKO_04243
Hypothetical protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.716
ackA
Hypothetical protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.572
pduW
Hypothetical protein; KEGG: stm:STM2057 1.5e-183 pduW; Propanediol utilization: propionate kinase K00932; COG: COG0282 Acetate kinase; Psort location: Cytoplasmic, score:9.97.
  
  
 0.572
tdcD
Hypothetical protein; Catalyzes the conversion of propionyl phosphate and ADP to propionate and ATP.
  
  
 0.572
CKO_00332
Hypothetical protein; KEGG: sty:STY2709 0. maeB; NADP-dependent malate dehydrogenase (decarboxylating) K00029; COG: COG0280 Phosphotransacetylase.
  
  
 0.548
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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