| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| lysS | prfB | CKO_04251 | CKO_04252 | Hypothetical protein; KEGG: eco:b2890 5.8e-262 lysS, asuD, herC; lysine tRNA synthetase, constitutive K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family. | Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.976 |
| lysS | rplB | CKO_04251 | CKO_04733 | Hypothetical protein; KEGG: eco:b2890 5.8e-262 lysS, asuD, herC; lysine tRNA synthetase, constitutive K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family. | Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.689 |
| lysS | rplM | CKO_04251 | CKO_04634 | Hypothetical protein; KEGG: eco:b2890 5.8e-262 lysS, asuD, herC; lysine tRNA synthetase, constitutive K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family. | Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.668 |
| lysS | rplP | CKO_04251 | CKO_04727 | Hypothetical protein; KEGG: eco:b2890 5.8e-262 lysS, asuD, herC; lysine tRNA synthetase, constitutive K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family. | Hypothetical protein; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.441 |
| lysS | rpsB | CKO_04251 | CKO_03199 | Hypothetical protein; KEGG: eco:b2890 5.8e-262 lysS, asuD, herC; lysine tRNA synthetase, constitutive K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family. | COG: COG0052 Ribosomal protein S2; Psort location: Cytoplasmic, score:8.96; Belongs to the universal ribosomal protein uS2 family. | 0.792 |
| lysS | rpsG | CKO_04251 | CKO_04747 | Hypothetical protein; KEGG: eco:b2890 5.8e-262 lysS, asuD, herC; lysine tRNA synthetase, constitutive K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family. | Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.855 |
| lysS | rpsQ | CKO_04251 | CKO_04725 | Hypothetical protein; KEGG: eco:b2890 5.8e-262 lysS, asuD, herC; lysine tRNA synthetase, constitutive K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family. | Hypothetical protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.552 |
| prfB | lysS | CKO_04252 | CKO_04251 | Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Hypothetical protein; KEGG: eco:b2890 5.8e-262 lysS, asuD, herC; lysine tRNA synthetase, constitutive K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.976 |
| prfB | rplB | CKO_04252 | CKO_04733 | Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.953 |
| prfB | rplM | CKO_04252 | CKO_04634 | Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.951 |
| prfB | rplP | CKO_04252 | CKO_04727 | Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Hypothetical protein; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.966 |
| prfB | rplT | CKO_04252 | CKO_01742 | Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Hypothetical protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.957 |
| prfB | rpmA | CKO_04252 | CKO_04589 | Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | COG: COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.971 |
| prfB | rpsB | CKO_04252 | CKO_03199 | Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | COG: COG0052 Ribosomal protein S2; Psort location: Cytoplasmic, score:8.96; Belongs to the universal ribosomal protein uS2 family. | 0.950 |
| prfB | rpsG | CKO_04252 | CKO_04747 | Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.968 |
| prfB | rpsP | CKO_04252 | CKO_03932 | Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | COG: COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.958 |
| prfB | rpsQ | CKO_04252 | CKO_04725 | Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Hypothetical protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.951 |
| rplB | lysS | CKO_04733 | CKO_04251 | Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Hypothetical protein; KEGG: eco:b2890 5.8e-262 lysS, asuD, herC; lysine tRNA synthetase, constitutive K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.689 |
| rplB | prfB | CKO_04733 | CKO_04252 | Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.953 |
| rplB | rplM | CKO_04733 | CKO_04634 | Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.996 |
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