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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04263COG: COG3097 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0267 family. (103 aa)    
Predicted Functional Partners:
CKO_02033
Hypothetical protein; COG: NOG09737 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.741
CKO_03436
Hypothetical protein; COG: COG3610 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.638
CKO_02537
Hypothetical protein; COG: COG3069 C4-dicarboxylate transporter; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.632
CKO_01087
COG: COG3102 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96.
  
     0.619
CKO_01288
Hypothetical protein; COG: COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction.
  
     0.614
CKO_04264
Hypothetical protein; KEGG: bte:BTH_I1550 7.3e-08 glucokinase/transcriptional regulator, RpiR family, fusion K00845; COG: COG1737 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
       0.611
menC
Hypothetical protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
     0.563
CKO_02686
Hypothetical protein; KEGG: cal:orf19.4683 1.0e-06 MLP1; myosin-like protein involved in translocation of macromolecules between the nucleoplasm and the NPC K01553; COG: COG3264 Small-conductance mechanosensitive channel; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.544
CKO_03626
Hypothetical protein; KEGG: pen:PSEEN0463 0.00012 peptidase, M23/M37 family K01423; COG: COG3061 Cell envelope opacity-associated protein A.
  
     0.542
CKO_01040
Hypothetical protein; COG: COG0814 Amino acid permeases; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.538
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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