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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04291Hypothetical protein; KEGG: dre:30298 4.8e-09 jak2b; Janus kinase 2b K04447; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00. (407 aa)    
Predicted Functional Partners:
CKO_04290
Hypothetical protein; KEGG: tpe:Tpen_0517 2.5e-11 succinyl-CoA synthetase, alpha subunit; COG: COG0074 Succinyl-CoA synthetase, alpha subunit.
 
     0.916
CKO_04289
Hypothetical protein; COG: NOG06389 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.891
CKO_04287
Hypothetical protein; COG: NOG06194 non supervised orthologous group.
 
     0.871
CKO_04288
Hypothetical protein.
       0.701
CKO_04286
Hypothetical protein; KEGG: shn:Shewana3_3435 7.2e-11 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.26; Belongs to the LysR transcriptional regulatory family.
 
     0.632
CKO_04292
Hypothetical protein.
       0.559
CKO_00902
Hypothetical protein; COG: NOG11459 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.530
CKO_04293
Hypothetical protein; KEGG: ssn:SSO_0497 1.3e-92 arcC; putative carbamate kinase K00926; COG: COG0549 Carbamate kinase; Belongs to the carbamate kinase family.
 
    0.480
CKO_00889
Hypothetical protein; COG: COG2948 Type IV secretory pathway, VirB10 components.
  
     0.431
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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