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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04299Hypothetical protein; COG: NOG07916 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00. (192 aa)    
Predicted Functional Partners:
CKO_04300
Hypothetical protein; COG: COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; Psort location: CytoplasmicMembrane, score:10.00.
 
   
 0.952
CKO_04301
Hypothetical protein; KEGG: syf:Synpcc7942_1406 2.2e-18 ATPase K02010; COG: COG1122 ABC-type cobalt transport system, ATPase component.
 
   
 0.907
CKO_04302
Hypothetical protein; KEGG: sme:SMb21276 8.1e-27 potA; putative spermidineputrescine ABC transporter ATP-binding protein K02052; COG: COG1118 ABC-type sulfate/molybdate transport systems, ATPase component.
 
   
 0.887
CKO_04298
Hypothetical protein; KEGG: cya:CYA_1151 4.7e-24 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042:K00972; COG: COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif.
 
   
 0.845
htpG
Hypothetical protein; Molecular chaperone. Has ATPase activity.
   
 0.835
CKO_02907
COG: COG4461 Uncharacterized protein conserved in bacteria, putative lipoprotein.
   
 0.818
alaS
Hypothetical protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.816
betA
Hypothetical protein; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
    
 0.772
rpoA
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.757
rpoB
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.755
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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