STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04304Hypothetical protein; COG: COG3722 Transcriptional regulator. (169 aa)    
Predicted Functional Partners:
CKO_01701
Hypothetical protein; COG: NOG13889 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
     
 0.921
CKO_00332
Hypothetical protein; KEGG: sty:STY2709 0. maeB; NADP-dependent malate dehydrogenase (decarboxylating) K00029; COG: COG0280 Phosphotransacetylase.
     
  0.900
mqo
Hypothetical protein; KEGG: eci:UTI89_C2490 3.3e-259 mqo; malate dehydrogenase K00116; COG: COG0579 Predicted dehydrogenase.
     
  0.900
maeA
Hypothetical protein; KEGG: sfx:S1879 2.9e-292 sfcA; NAD-linked malate dehydrogenase (malic enzyme) K00027; COG: COG0281 Malic enzyme; Belongs to the malic enzymes family.
     
  0.900
fumC
Hypothetical protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
     
  0.900
CKO_01623
Hypothetical protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.900
CKO_02424
Hypothetical protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.900
CKO_03717
Hypothetical protein; KEGG: yps:YPTB1526 7.2e-193 sfcA, maeA; NAD-dependent malic enzyme K00027; COG: COG0281 Malic enzyme; Psort location: Cytoplasmic, score:8.96.
     
  0.900
CKO_03749
Hypothetical protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.900
CKO_03906
Hypothetical protein; KEGG: stm:STM4183 5.2e-277 aceB; malate synthase A K01638; COG: COG2225 Malate synthase; Psort location: Cytoplasmic, score:9.97.
     
  0.900
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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