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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04356Hypothetical protein; COG: COG3456 Uncharacterized conserved protein, contains FHA domain; Psort location: Cytoplasmic, score:8.96. (319 aa)    
Predicted Functional Partners:
CKO_04357
Hypothetical protein; COG: COG3157 Hemolysin-coregulated protein (uncharacterized); Psort location: Cytoplasmic, score:8.96.
 
  
 0.875
CKO_04361
COG: COG3501 Uncharacterized protein conserved in bacteria.
 
  
 0.803
CKO_04355
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.773
CKO_01867
Hypothetical protein; COG: NOG09073 non supervised orthologous group.
  
    0.745
CKO_01902
Hypothetical protein; COG: NOG18590 non supervised orthologous group.
  
     0.743
CKO_04373
COG: COG3539 P pilus assembly protein, pilin FimA; Psort location: Extracellular, score:9.71.
  
     0.701
CKO_01868
Hypothetical protein; COG: NOG14014 non supervised orthologous group.
  
     0.698
CKO_01856
Hypothetical protein; KEGG: chu:CHU_1335 4.1e-09 CHU large protein; endoglucanase-related protein, glucosyl hydrolase family 9 protein K01238; COG: COG5492 Bacterial surface proteins containing Ig-like domains.
  
     0.664
CKO_01864
Hypothetical protein.
  
     0.633
CKO_03128
Hypothetical protein; KEGG: eci:UTI89_C2514 1.2e-55 yfaL; hypothetical protein YfaL precursor K07279; COG: COG3468 Type V secretory pathway, adhesin AidA; Psort location: OuterMembrane, score:9.83.
  
     0.586
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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