STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04386Hypothetical protein; COG: NOG08099 non supervised orthologous group. (163 aa)    
Predicted Functional Partners:
CKO_04389
Hypothetical protein; KEGG: eci:UTI89_C3417 1.1e-198 hybB; probable Ni/Fe-hydrogenase 2 B-type cytochrome subunit K00178; COG: COG5557 Polysulphide reductase; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.981
CKO_04391
Hypothetical protein; KEGG: sty:STY3321 1.0e-202 hyb0; hydrogenase small chain K06282; COG: COG1740 Ni,Fe-hydrogenase I small subunit; Psort location: Periplasmic, score:9.76.
 
 
 0.980
hybF
Hypothetical protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.978
CKO_04388
Hypothetical protein; KEGG: ecc:c3731 1.3e-298 hybC; hydrogenase-2 large chain precursor K06281; COG: COG0374 Ni,Fe-hydrogenase I large subunit; Psort location: Periplasmic, score:9.44; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.971
CKO_04387
Hypothetical protein; KEGG: sfx:S3241 4.8e-77 hybD; hydrogenase-2 component K08567; COG: COG0680 Ni,Fe-hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96.
 
  
 0.968
CKO_04390
Hypothetical protein; KEGG: eci:UTI89_C3418 8.6e-158 hybA; hydrogenase-2 operon protein HybA precursor K00396; COG: COG0437 Fe-S-cluster-containing hydrogenase components 1; Psort location: Periplasmic, score:10.00.
 
    0.930
CKO_04384
Hypothetical protein; COG: COG0298 Hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96.
 
  
 0.924
CKO_01293
Hypothetical protein; KEGG: eca:ECA2991 0. nasB; nitrite reductase [NAD(P)H] large subunit K00362; COG: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; Psort location: Cytoplasmic, score:9.26; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.828
CKO_04789
Hypothetical protein; KEGG: stm:STM3474 0. nirB; nitrite reductase, large subunit K00362; COG: COG1251 NAD(P)H-nitrite reductase; Psort location: Cytoplasmic, score:9.97; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.770
CKO_02030
Hypothetical protein; COG: NOG09844 non supervised orthologous group.
  
     0.751
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.