STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04406Hypothetical protein; KEGG: sec:SC3108 2.6e-188 yqhD; putative alcohol dehydrogenase K08325; COG: COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family; Psort location: Cytoplasmic, score:9.26. (387 aa)    
Predicted Functional Partners:
mgsA
Hypothetical protein; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
  
 
 0.922
CKO_03049
Hypothetical protein; KEGG: stm:STM4108 2.8e-182 gldA; glycerol dehydrogenase K00005; COG: COG0371 Glycerol dehydrogenase and related enzymes; Psort location: Cytoplasmic, score:9.26.
     
 0.906
CKO_04473
Hypothetical protein; KEGG: plu:plu4115 6.9e-117 gldA; glycerol dehydrogenase (GLDH) K00005; COG: COG0371 Glycerol dehydrogenase and related enzymes; Psort location: Cytoplasmic, score:9.26.
     
 0.906
guaA
Hypothetical protein; Catalyzes the synthesis of GMP from XMP.
  
    0.880
CKO_04405
Hypothetical protein.
       0.752
CKO_03132
Hypothetical protein; Cleaves 6-deoxy-6-sulfo-D-fructose 1-phosphate (SFP) to form dihydroxyacetone phosphate (DHAP) and 3-sulfolactaldehyde (SLA). Belongs to the aldolase LacD family.
   
    0.722
arcA
Hypothetical protein; KEGG: sty:STY4805 7.1e-218 arginine deiminase K01478; COG: COG2235 Arginine deiminase; Psort location: Cytoplasmic, score:8.96.
   
    0.722
CKO_04407
Hypothetical protein; KEGG: eco:b3012 9.1e-138 dkgA, yqhE; 2,5-diketo-D-gluconate reductase A K06221; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase; Psort location: Cytoplasmic, score:8.96.
  
  
 0.694
CKO_04404
Hypothetical protein; KEGG: bcz:BCZK3497 4.8e-07 adaA; transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins.
     
 0.657
rhaS
Hypothetical protein; Activates expression of the rhaBAD and rhaT operons.
  
    0.624
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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