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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04416Hypothetical protein; KEGG: eci:UTI89_C3455 4.5e-97 mdaB; modulator of drug activity B K03923; COG: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B). (193 aa)    
Predicted Functional Partners:
kefB
Hypothetical protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
 
 
 0.829
kefC
Hypothetical protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
 
 
 0.827
CKO_00505
Hypothetical protein; KEGG: sdy:SDY_2486 1.9e-217 putative aminotransferase K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score:8.96.
   
    0.811
CKO_02559
Hypothetical protein; KEGG: sec:SC0634 8.8e-188 ybdL; putative aminotransferase K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
    0.811
CKO_04417
Hypothetical protein; COG: COG1359 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
     
 0.769
CKO_04414
Hypothetical protein; KEGG: rha:RHA1_ro05622 6.7e-39 response regulator (protein-glutamate methylesterase) K07669; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
       0.513
CKO_04415
Hypothetical protein; KEGG: stm:STM3178 3.2e-199 ygiY; putative sensory histidine kinase in regulatory system K07645; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.97.
       0.513
CKO_00421
Hypothetical protein; KEGG: eco:b2379 2.5e-215 yfdZ; putative PLP-dependent aminotransferase; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score:8.96.
   
    0.497
CKO_02596
Hypothetical protein; KEGG: stm:STM0578 6.5e-105 nfnB; dihydropteridine reductase/oxygen-insensitive NAD(P)H nitroreductase K00357; COG: COG0778 Nitroreductase.
 
  
 0.484
lysA
Hypothetical protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.474
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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