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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04420COG: COG4289 Uncharacterized protein conserved in bacteria. (606 aa)    
Predicted Functional Partners:
CKO_04418
Hypothetical protein; KEGG: sgl:SG2119 1.3e-124 putative glucuronyl hydrolase K01238; COG: NOG09941 non supervised orthologous group.
 
     0.858
CKO_04419
Hypothetical protein; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.733
CKO_01082
Hypothetical protein; COG: COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
 
     0.731
CKO_02447
Hypothetical protein; KEGG: sgl:SG2119 1.2e-94 putative glucuronyl hydrolase K01238; COG: NOG09941 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.676
CKO_03264
Hypothetical protein; KEGG: sde:Sde_0777 2.4e-98 ribosomal protein L11 methyltransferase K01209; COG: COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.601
CKO_04421
Hypothetical protein; KEGG: bcz:BCZK3497 6.4e-12 adaA; transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.26.
       0.569
CKO_00875
Hypothetical protein; KEGG: eci:UTI89_C2208 1.6e-259 hypothetical protein K01286; COG: COG1680 Beta-lactamase class C and other penicillin binding proteins; Psort location: CytoplasmicMembrane, score:9.86.
  
     0.441
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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