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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04431Hypothetical protein; KEGG: azo:azo2868 2.4e-36 ygiD; protocatechuate 4,5-dioxygenase K04099; COG: COG3384 Uncharacterized conserved protein. (246 aa)    
Predicted Functional Partners:
CKO_04858
Hypothetical protein; KEGG: shn:Shewana3_3385 2.0e-13 hypoxanthine phosphoribosyltransferase K00760; COG: COG1741 Pirin-related protein; Psort location: Cytoplasmic, score:8.96; Belongs to the pirin family.
 
  
 0.743
CKO_02193
Hypothetical protein; KEGG: shn:Shewana3_3385 2.5e-32 hypoxanthine phosphoribosyltransferase K00760; COG: COG1741 Pirin-related protein; Belongs to the pirin family.
 
  
 0.690
CKO_04507
COG: COG1741 Pirin-related protein; Belongs to the pirin family.
 
  
 0.626
garL
Hypothetical protein; Catalyzes the reversible retro-aldol cleavage of both 5-keto- 4-deoxy-D-glucarate and 2-keto-3-deoxy-D-glucarate to pyruvate and tartronic semialdehyde; Belongs to the HpcH/HpaI aldolase family. KDGluc aldolase subfamily.
  
  
 0.557
zupT
Hypothetical protein; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
       0.525
metG
Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
     0.471
CKO_01293
Hypothetical protein; KEGG: eca:ECA2991 0. nasB; nitrite reductase [NAD(P)H] large subunit K00362; COG: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; Psort location: Cytoplasmic, score:9.26; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.411
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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