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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureBHypothetical protein; KEGG: ece:Z1144 5.9e-40 ureB; putative urease structural subunit B (beta) K01429; COG: COG0832 Urea amidohydrolase (urease) beta subunit; Belongs to the urease beta subunit family. (106 aa)    
Predicted Functional Partners:
ureA
Hypothetical protein; KEGG: ece:Z1143 6.1e-45 ureA; putative urease structural subunit A (gamma) K01430; COG: COG0831 Urea amidohydrolase (urease) gamma subunit; Belongs to the urease gamma subunit family.
 0.999
ureC
Hypothetical protein; KEGG: ece:Z1584 1.5e-279 ureC_2; putative urease structural subunit C (alpha) K01428; COG: COG0804 Urea amidohydrolase (urease) alpha subunit; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 0.999
ureD
Hypothetical protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.993
ureF
Hypothetical protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.992
ureE
Hypothetical protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.990
ureG
Hypothetical protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.985
CKO_04083
Hypothetical protein; KEGG: reh:H16_A1087 9.9e-14 ureG; UreA amidohydrolase (urease) regulatory and maturation protein UreG; COG: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; Psort location: Cytoplasmic, score:9.97.
  
  
 0.738
CKO_04453
Hypothetical protein; COG: COG0471 Di- and tricarboxylate transporters; Psort location: CytoplasmicMembrane, score:10.00.
       0.518
CKO_01559
Hypothetical protein; KEGG: pen:PSEEN4891 6.1e-93 branched-chain amino acid transport ABC transporter, ATP-binding component; COG: COG4674 Uncharacterized ABC-type transport system, ATPase component.
 
   
 0.503
CKO_01562
Hypothetical protein; COG: COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; Psort location: Periplasmic, score:9.76.
 
   
 0.485
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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