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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04472Hypothetical protein; KEGG: reh:H16_B0142 1.8e-37 acoR; transcriptional regulator of acetoin catabolism,PspF-family K01529; COG: COG3284 Transcriptional activator of acetoin/glycerol metabolism. (641 aa)    
Predicted Functional Partners:
CKO_01211
KEGG: ecc:c1657 7.5e-95 protein ycgS K05879; COG: COG2376 Dihydroxyacetone kinase.
  
 
 
 0.897
CKO_04605
Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.810
CKO_01212
Hypothetical protein; KEGG: ecc:c1658 7.0e-179 ycgT; putative dihydroxyacetone kinase K05878; COG: COG2376 Dihydroxyacetone kinase; Psort location: Cytoplasmic, score:8.96.
  
 
 
 0.797
CKO_04479
Hypothetical protein; KEGG: rle:RL2900 2.7e-129 dhaK; putative dihydroxyacetone kinase K00863; COG: COG2376 Dihydroxyacetone kinase.
    
 
 0.768
CKO_04470
Hypothetical protein.
       0.741
CKO_04471
Hypothetical protein.
       0.741
CKO_04473
Hypothetical protein; KEGG: plu:plu4115 6.9e-117 gldA; glycerol dehydrogenase (GLDH) K00005; COG: COG0371 Glycerol dehydrogenase and related enzymes; Psort location: Cytoplasmic, score:9.26.
  
  
 0.653
CKO_01210
Hypothetical protein; KEGG: dde:Dde_1180 1.9e-80 phosphoenolpyruvate-protein phosphotransferase K02766:K02768:K02784; COG: COG3412 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:9.97; Belongs to the PEP-utilizing enzyme family.
 
   
 0.551
CKO_05134
Hypothetical protein; KEGG: reh:H16_A2683 2.9e-21 response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K01529; COG: COG3933 Transcriptional antiterminator; Psort location: Cytoplasmic, score:8.96.
  
   
 0.459
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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