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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04483Hypothetical protein; COG: COG1695 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.96. (142 aa)    
Predicted Functional Partners:
CKO_04481
Hypothetical protein.
       0.773
CKO_04480
Hypothetical protein; COG: COG2375 Siderophore-interacting protein; Psort location: Cytoplasmic, score:8.96.
 
   
 0.763
CKO_04482
Hypothetical protein.
       0.572
CKO_03396
Hypothetical protein; KEGG: stm:STM4580.S 1.5e-217 nadR; nicotinamide-nucleotide adenylyltransferase K00952:K06210:K06211; COG: COG3172 Predicted ATPase/kinase involved in NAD metabolism; Psort location: Cytoplasmic, score:8.96.
  
    0.527
CKO_01094
Hypothetical protein; KEGG: eci:UTI89_C2071 1.3e-81 yecD; hypothetical protein; COG: COG1335 Amidases related to nicotinamidase.
 
     0.432
CKO_00978
Hypothetical protein; COG: COG2375 Siderophore-interacting protein.
 
   
 0.420
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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