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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04490KEGG: ecp:ECP_3178 1.1e-148 hypothetical oxidoreductase YgjR; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score:8.96. (328 aa)    
Predicted Functional Partners:
CKO_03993
Hypothetical protein; KEGG: ypm:YP_1136 4.9e-297 ilvB1; putative thiamine pyrophosphate-dependent protein K03336; COG: COG3962 Acetolactate synthase; Belongs to the TPP enzyme family.
  
  
 0.774
CKO_03984
Hypothetical protein; COG: COG3718 Uncharacterized enzyme involved in inositol metabolism; Psort location: Cytoplasmic, score:8.96.
  
  
 0.715
galK
Hypothetical protein; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.644
CKO_04489
Hypothetical protein; COG: COG1451 Predicted metal-dependent hydrolase.
       0.622
lysS
Hypothetical protein; KEGG: eco:b2890 5.8e-262 lysS, asuD, herC; lysine tRNA synthetase, constitutive K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.612
CKO_02602
Hypothetical protein; KEGG: hma:rrnAC0265 2.6e-07 apl; AP-endonuclease/AP-lyase K01151:K01741; COG: COG1082 Sugar phosphate isomerases/epimerases; Psort location: Cytoplasmic, score:8.96.
  
  
 0.558
CKO_03985
Hypothetical protein; KEGG: hne:HNE_2184 2.4e-73 iolE; 2-keto-myo-inositol dehydratase K01726; COG: COG1082 Sugar phosphate isomerases/epimerases; Psort location: Cytoplasmic, score:8.96.
  
  
 0.558
CKO_05006
Hypothetical protein; COG: NOG13334 non supervised orthologous group.
  
  
 0.549
rlmG
Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.
 
     0.540
CKO_00129
Hypothetical protein; KEGG: stm:STM3922 1.5e-176 rffG; dTDP-glucose 4,6-dehydratase K01710; COG: COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.529
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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