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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaC-2Hypothetical protein; KEGG: ecc:c3850 1.5e-256 uxaC; uronate isomerase K01812; COG: COG1904 Glucuronate isomerase. (491 aa)    
Predicted Functional Partners:
uxaB
Hypothetical protein; KEGG: eco:b1521 2.5e-231 uxaB, uxaB'; tagaturonate reductase K00041; COG: COG0246 Mannitol-1-phosphate/altronate dehydrogenases; Psort location: Cytoplasmic, score:8.96.
 
 
 0.990
uxuA-2
Hypothetical protein; Catalyzes the dehydration of D-mannonate.
 
  
 0.968
uxuA
Hypothetical protein; Catalyzes the dehydration of D-mannonate.
 
  
 0.967
CKO_01572
Hypothetical protein; KEGG: ecc:c1968 1.7e-223 ydfI; hypothetical oxidoreductase YdfI; COG: COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
 
 
 0.936
CKO_03733
Hypothetical protein; KEGG: ecc:c1968 7.5e-214 ydfI; hypothetical oxidoreductase YdfI; COG: COG0246 Mannitol-1-phosphate/altronate dehydrogenases; Psort location: Cytoplasmic, score:8.96.
 
 
 0.935
CKO_04493
Hypothetical protein; KEGG: ecp:ECP_3182 4.9e-249 altronate hydrolase K01685; COG: COG2721 Altronate dehydratase; Psort location: Cytoplasmic, score:8.96.
 
  
 0.931
uxaC
KEGG: sha:SH2648 7.1e-131 hypothetical protein K01812; COG: COG1904 Glucuronate isomerase; Psort location: Cytoplasmic, score:8.96.
  
  
 
0.905
CKO_01574
Hypothetical protein; KEGG: stm:STM1506 7.5e-159 rspB; putative dehydrogenase K08322; COG: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; Psort location: Cytoplasmic, score:9.26.
     
 0.904
kduI
Hypothetical protein; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
  
 0.839
araD
Hypothetical protein; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction).
     
 0.809
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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