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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04503Hypothetical protein; KEGG: lpn:lpg0671 0.0020 ndh; NADH dehydrogenase transmembrane protein K03885; COG: COG2259 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46. (130 aa)    
Predicted Functional Partners:
CKO_04504
Hypothetical protein; KEGG: eci:UTI89_C3540 2.6e-172 yqjG; putative transferase K07393; COG: COG0435 Predicted glutathione S-transferase; Psort location: Cytoplasmic, score:8.96.
  
    0.634
CKO_04502
Hypothetical protein; COG: NOG11454 non supervised orthologous group.
 
     0.571
CKO_04500
Hypothetical protein; KEGG: tma:TM1614 0.0016 ATP synthase F0, subunit b K02109; COG: COG4575 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
  
    0.453
CKO_04501
COG: COG5393 Predicted membrane protein.
  
    0.445
CKO_02321
Hypothetical protein; COG: NOG13870 non supervised orthologous group.
  
   
 0.432
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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