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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04504Hypothetical protein; KEGG: eci:UTI89_C3540 2.6e-172 yqjG; putative transferase K07393; COG: COG0435 Predicted glutathione S-transferase; Psort location: Cytoplasmic, score:8.96. (331 aa)    
Predicted Functional Partners:
CKO_04503
Hypothetical protein; KEGG: lpn:lpg0671 0.0020 ndh; NADH dehydrogenase transmembrane protein K03885; COG: COG2259 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
  
    0.634
CKO_04505
COG: COG3152 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
       0.530
CKO_02976
Hypothetical protein; KEGG: stm:STM0255 1.2e-128 yafB; 2,5-diketo-D-gluconate reductase B K06222; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase; Psort location: Cytoplasmic, score:8.96.
   
  
 0.430
CKO_04407
Hypothetical protein; KEGG: eco:b3012 9.1e-138 dkgA, yqhE; 2,5-diketo-D-gluconate reductase A K06221; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase; Psort location: Cytoplasmic, score:8.96.
   
  
 0.430
CKO_04500
Hypothetical protein; KEGG: tma:TM1614 0.0016 ATP synthase F0, subunit b K02109; COG: COG4575 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
  
    0.425
CKO_02047
Hypothetical protein; KEGG: mav:MAV_3849 3.8e-29 wrbA; NAD(P)H:quinone oxidoreductase, type IV K00355; COG: COG0655 Multimeric flavodoxin WrbA.
 
  
 0.420
CKO_04381
Hypothetical protein; KEGG: eci:UTI89_C3411 2.1e-147 yghU; hypothetical GST-like protein YghU K00799; COG: COG0625 Glutathione S-transferase.
  
  
 0.417
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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