STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04507COG: COG1741 Pirin-related protein; Belongs to the pirin family. (233 aa)    
Predicted Functional Partners:
CKO_04508
Hypothetical protein; COG: NOG18539 non supervised orthologous group.
       0.717
CKO_04506
Hypothetical protein; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96; Belongs to the LysR transcriptional regulatory family.
 
 
 
 0.714
CKO_04431
Hypothetical protein; KEGG: azo:azo2868 2.4e-36 ygiD; protocatechuate 4,5-dioxygenase K04099; COG: COG3384 Uncharacterized conserved protein.
 
  
 0.626
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.