STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04534Hypothetical protein; KEGG: ecs:ECs4014 9.0e-60 N-acetyl-galactosamine / galactosamine PTS system enzyme IIA component K02744; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; Psort location: Cytoplasmic, score:8.96. (144 aa)    
Predicted Functional Partners:
CKO_04532
Hypothetical protein; KEGG: eci:UTI89_C3570 4.3e-44 agaC; PTS system, N-acetylgalactosamine-specific IIC component 1 K02746; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.998
CKO_04533
Hypothetical protein; KEGG: eci:UTI89_C3571 1.7e-56 agaD; PTS system, N-acetylgalactosamine-specific IID component K02747; COG: COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.998
CKO_04531
Hypothetical protein; KEGG: ecj:JW3102 6.3e-75 agaV; N-acetylgalactosamine-specific enzyme IIB component of PTS K02745; COG: COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; Psort location: Cytoplasmic, score:9.26.
 
 
 0.997
CKO_04535
Hypothetical protein; KEGG: ecp:ECP_3227 7.3e-168 putative N-acetylgalctosamine-6-phosphate deacetylase K02079; COG: COG1820 N-acetylglucosamine-6-phosphate deacetylase; Psort location: Periplasmic, score:9.64.
 
 
 0.982
CKO_01159
Hypothetical protein; KEGG: eci:UTI89_C2017 1.2e-144 manZ; PTS enzyme IID, mannose-specific K02796; COG: COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.937
CKO_01160
Hypothetical protein; KEGG: eci:UTI89_C2015 1.9e-128 manY; PTS enzyme IIC, mannose-specific K02795; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.936
CKO_05129
Hypothetical protein; KEGG: lsl:LSL_1949 6.6e-48 PTS system, mannose-specific IID component K00890; COG: COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.936
CKO_05130
Hypothetical protein; KEGG: lsl:LSL_1950 2.3e-29 PTS system, mannose-specific IIC component K00890; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.935
CKO_00377
Hypothetical protein; KEGG: bci:BCI_0069 7.4e-33 ptsH; phosphocarrier protein HPr K00890; COG: COG1925 Phosphotransferase system, HPr-related proteins; Psort location: Cytoplasmic, score:9.97.
   
 0.925
CKO_05131
Hypothetical protein; KEGG: spt:SPA3621 8.7e-78 putative PTS system protein K02794; COG: COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; Psort location: Cytoplasmic, score:9.26.
 
  
 0.922
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.