Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04545Hypothetical protein; COG: COG0701 Predicted permeases; Psort location: CytoplasmicMembrane, score:10.00. (345 aa)    
Predicted Functional Partners:
CKO_03080
Hypothetical protein; COG: COG0471 Di- and tricarboxylate transporters; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.623
CKO_03244
Hypothetical protein; KEGG: eci:UTI89_C0136 2.0e-245 cueO; blue copper oxidase CueO precursor; COG: COG2132 Putative multicopper oxidases; Psort location: Periplasmic, score:10.00.
  
  
 0.592
ftsP
Hypothetical protein; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress; Belongs to the FtsP family.
  
  
 0.592
CKO_03760
Hypothetical protein; KEGG: reh:H16_A0378 0.0039 predicted GTPase K01529; COG: COG0699 Predicted GTPases (dynamin-related).
  
     0.591
CKO_04546
Hypothetical protein.
       0.564
CKO_03434
Hypothetical protein; COG: NOG09075 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.561
gmm
Hypothetical protein; Hydrolyzes GDP-mannose; Belongs to the Nudix hydrolase family.
  
    0.511
CKO_01498
COG: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
  
     0.457
ves
COG: COG3758 Uncharacterized protein conserved in bacteria; Belongs to the Ves family.
  
     0.456
CKO_02612
COG: COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.447
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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