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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04552Hypothetical protein; KEGG: bta:508918 0.00045 SCP2; sterol carrier protein 2 K08764; COG: COG3154 Putative lipid carrier protein. (158 aa)    
Predicted Functional Partners:
CKO_04554
Hypothetical protein; KEGG: eci:UTI89_C3586 4.7e-150 yhbV; hypothetical protein YhbV K01423; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score:8.96.
 
  
 0.983
CKO_04553
Hypothetical protein; KEGG: ecp:ECP_3246 5.8e-175 putative protease YhbU precursor K08303; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score:8.96.
 
  
 0.922
CKO_04551
Hypothetical protein; KEGG: sec:SC3213 7.7e-86 yhbS; putative ABC superfamily (membrane) transport protein K03824; COG: COG3153 Predicted acetyltransferase; Psort location: Cytoplasmic, score:8.96.
  
  
 0.664
CKO_00701
Hypothetical protein; KEGG: stm:STM2136 1.0e-241 yegQ; putative protease K08303; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score:8.96.
 
  
 0.616
CKO_01473
Hypothetical protein; KEGG: eco:b1435 0. ydcP; putative protease K08303; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score:8.96.
 
  
 0.539
CKO_04616
Hypothetical protein; KEGG: eci:UTI89_C3647 7.0e-60 yhcC; hypothetical protein; COG: COG1242 Predicted Fe-S oxidoreductase.
 
     0.497
CKO_01297
Hypothetical protein; KEGG: sec:SC1760 1.1e-292 narX; sensory histidine kinase in two component regulatory system with NarL, senses nitrate/nitrite, regulates anaerobic respiration and fermentation K07673; COG: COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific; Psort location: CytoplasmicMembrane, score:9.82.
 
     0.414
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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