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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04553Hypothetical protein; KEGG: ecp:ECP_3246 5.8e-175 putative protease YhbU precursor K08303; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score:8.96. (331 aa)    
Predicted Functional Partners:
CKO_04554
Hypothetical protein; KEGG: eci:UTI89_C3586 4.7e-150 yhbV; hypothetical protein YhbV K01423; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score:8.96.
 
 
 0.990
CKO_04552
Hypothetical protein; KEGG: bta:508918 0.00045 SCP2; sterol carrier protein 2 K08764; COG: COG3154 Putative lipid carrier protein.
 
  
 0.922
CKO_04555
Hypothetical protein.
       0.686
CKO_03411
Hypothetical protein; COG: NOG06143 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
    0.496
CKO_03145
Hypothetical protein; KEGG: ecj:JW3838 8.6e-229 hemN; coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent K02495; COG: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Psort location: Cytoplasmic, score:9.97; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.448
CKO_00715
Hypothetical protein; KEGG: sty:STY2335 1.6e-53 udk; uridine kinase K00876; COG: COG0572 Uridine kinase; Psort location: Cytoplasmic, score:8.96.
  
    0.421
CKO_02656
Hypothetical protein; KEGG: eci:UTI89_C4034 2.1e-218 chuW; putative oxygen independent coproporphyrinogen III oxidase K02495; COG: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Psort location: Cytoplasmic, score:9.97.
  
    0.400
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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