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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04554Hypothetical protein; KEGG: eci:UTI89_C3586 4.7e-150 yhbV; hypothetical protein YhbV K01423; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score:8.96. (298 aa)    
Predicted Functional Partners:
CKO_04553
Hypothetical protein; KEGG: ecp:ECP_3246 5.8e-175 putative protease YhbU precursor K08303; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score:8.96.
 
 
 0.990
CKO_04552
Hypothetical protein; KEGG: bta:508918 0.00045 SCP2; sterol carrier protein 2 K08764; COG: COG3154 Putative lipid carrier protein.
 
  
 0.983
CKO_00701
Hypothetical protein; KEGG: stm:STM2136 1.0e-241 yegQ; putative protease K08303; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score:8.96.
 
 
 0.872
CKO_01473
Hypothetical protein; KEGG: eco:b1435 0. ydcP; putative protease K08303; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score:8.96.
 
 
 0.839
CKO_04555
Hypothetical protein.
       0.686
CKO_01302
Hypothetical protein; KEGG: stt:t1672 2.2e-285 narH; respiratory nitrate reductase 1 beta chain K00371; COG: COG1140 Nitrate reductase beta subunit; Psort location: Cytoplasmic, score:9.26.
 
    0.490
CKO_01502
Hypothetical protein; KEGG: spt:SPA1290 3.7e-283 narY; respiratory nitrate reductase 2 beta chain K08346; COG: COG1140 Nitrate reductase beta subunit; Psort location: Cytoplasmic, score:9.26.
  
    0.424
CKO_00042
Hypothetical protein; COG: COG3391 Uncharacterized conserved protein.
   
    0.422
CKO_01494
Hypothetical protein; COG: COG3391 Uncharacterized conserved protein.
   
    0.422
CKO_02606
Hypothetical protein; KEGG: dra:DRA0202 0.00030 superoxide dismutase (sodC), Cu-Zn family K04565; COG: COG3391 Uncharacterized conserved protein.
   
    0.422
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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