| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CKO_03523 | rbfA | CKO_03523 | CKO_04566 | Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02. | Hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.885 |
| CKO_03523 | rplR | CKO_03523 | CKO_04717 | Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02. | Hypothetical protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.960 |
| CKO_03523 | rpmD | CKO_03523 | CKO_04715 | Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02. | COG: COG1841 Ribosomal protein L30/L7E; Psort location: Cytoplasmic, score:8.96. | 0.943 |
| CKO_03523 | rpsD | CKO_03523 | CKO_04709 | Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02. | Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.964 |
| CKO_03523 | rpsE | CKO_03523 | CKO_04716 | Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02. | Hypothetical protein; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.960 |
| CKO_03523 | rpsF | CKO_03523 | CKO_03633 | Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02. | Hypothetical protein; Binds together with S18 to 16S ribosomal RNA. | 0.910 |
| CKO_03523 | rpsO | CKO_03523 | CKO_04564 | Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02. | Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.853 |
| CKO_03523 | rpsQ | CKO_03523 | CKO_04725 | Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02. | Hypothetical protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.923 |
| CKO_03523 | truB | CKO_03523 | CKO_04565 | Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02. | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.917 |
| infB | rbfA | CKO_04569 | CKO_04566 | Hypothetical protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.955 |
| infB | rplR | CKO_04569 | CKO_04717 | Hypothetical protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Hypothetical protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.960 |
| infB | rpmD | CKO_04569 | CKO_04715 | Hypothetical protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | COG: COG1841 Ribosomal protein L30/L7E; Psort location: Cytoplasmic, score:8.96. | 0.943 |
| infB | rpsD | CKO_04569 | CKO_04709 | Hypothetical protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.971 |
| infB | rpsE | CKO_04569 | CKO_04716 | Hypothetical protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Hypothetical protein; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.975 |
| infB | rpsF | CKO_04569 | CKO_03633 | Hypothetical protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Hypothetical protein; Binds together with S18 to 16S ribosomal RNA. | 0.930 |
| infB | rpsO | CKO_04569 | CKO_04564 | Hypothetical protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.922 |
| infB | rpsQ | CKO_04569 | CKO_04725 | Hypothetical protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Hypothetical protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.923 |
| infB | truB | CKO_04569 | CKO_04565 | Hypothetical protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.984 |
| rbfA | CKO_03523 | CKO_04566 | CKO_03523 | Hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02. | 0.885 |
| rbfA | infB | CKO_04566 | CKO_04569 | Hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | Hypothetical protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.955 |
STRING v12.5 is now available!
