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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04594Hypothetical protein; KEGG: reu:Reut_A3046 0.00056 hemK; modification methylase HemK K02493; COG: COG3113 Predicted NTP binding protein (contains STAS domain). (97 aa)    
Predicted Functional Partners:
CKO_04595
Hypothetical protein; COG: COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
 
 
 0.991
CKO_04598
Hypothetical protein; KEGG: pen:PSEEN1099 1.2e-82 ttg2A; toluene tolerance ABC efflux transporter, ATP-binding protein K06020; COG: COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
  
 0.974
CKO_04596
Hypothetical protein; COG: COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
 0.972
CKO_04597
Hypothetical protein; COG: COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
 0.970
lptC
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.
 
     0.816
CKO_00079
Hypothetical protein; KEGG: psp:PSPPH_5214 2.0e-07 atpI; ATP synthase F0, I subunit K02116; COG: COG3312 F0F1-type ATP synthase, subunit I; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.770
CKO_02682
Hypothetical protein; COG: COG3923 Primosomal replication protein N; Psort location: Cytoplasmic, score:8.96.
  
     0.764
CKO_01613
Hypothetical protein; COG: NOG06063 non supervised orthologous group.
  
     0.758
zapC
Hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.756
CKO_03691
Hypothetical protein; COG: NOG09783 non supervised orthologous group.
  
     0.756
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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