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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04596Hypothetical protein; COG: COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component. (183 aa)    
Predicted Functional Partners:
CKO_04597
Hypothetical protein; COG: COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.999
CKO_04598
Hypothetical protein; KEGG: pen:PSEEN1099 1.2e-82 ttg2A; toluene tolerance ABC efflux transporter, ATP-binding protein K06020; COG: COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
 0.999
CKO_04595
Hypothetical protein; COG: COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
 
 0.997
CKO_04594
Hypothetical protein; KEGG: reu:Reut_A3046 0.00056 hemK; modification methylase HemK K02493; COG: COG3113 Predicted NTP binding protein (contains STAS domain).
  
 0.972
CKO_00445
COG: COG2853 Surface lipoprotein.
 
   
 0.832
CKO_01059
COG: COG1360 Flagellar motor protein.
 
 
   0.718
CKO_02854
COG: COG1360 Flagellar motor protein; Psort location: CytoplasmicMembrane, score:8.02.
 
 
   0.710
lptA
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.
 
  
 0.593
CKO_04593
Hypothetical protein; COG: COG5007 Predicted transcriptional regulator, BolA superfamily; Belongs to the BolA/IbaG family.
     
 0.574
CKO_04600
Hypothetical protein; KEGG: stm:STM3315 3.0e-162 yrbH; putative sugar phosphate isomerase K06041; COG: COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Psort location: Cytoplasmic, score:8.96.
       0.571
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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