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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rapZHypothetical protein; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily. (284 aa)    
Predicted Functional Partners:
CKO_04607
Hypothetical protein; KEGG: sbo:SBO_3178 1.6e-78 ptsN; phosphotransferase system enzyme IIA K02806; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:9.97.
  
  
 0.947
CKO_02346
Hypothetical protein; KEGG: mth:MTH1018 6.0e-06 LPPG:FO 2-phopspho-L-lactate transferase K00924; COG: COG0391 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
  
  
 0.897
CKO_04609
Hypothetical protein; KEGG: aha:AHA_3919 9.7e-31 multiphosphoryl transfer protein (MTP) K00924; COG: COG1925 Phosphotransferase system, HPr-related proteins; Psort location: Cytoplasmic, score:8.96.
  
  
 0.876
CKO_03579
Hypothetical protein; KEGG: vvy:VVA1392 3.8e-36 PTS fructose-specific enzyme IIA component homolog K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:9.26.
  
  
 0.853
CKO_00417
Hypothetical protein; KEGG: sfx:S2588 0. putative PTS system enzyme IIA component, enzyme I K02766:K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:9.97; Belongs to the PEP-utilizing enzyme family.
  
  
 0.821
CKO_03046
Hypothetical protein; KEGG: sec:SC4002 0. ptsA; general PTS family, enzyme I K02766:K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:9.97.
  
  
 0.821
CKO_04606
COG: COG1544 Ribosome-associated protein Y (PSrp-1); Psort location: Cytoplasmic, score:8.96.
 
  
 0.795
rne
Hypothetical protein; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.
   
 
 0.777
CKO_04655
Hypothetical protein; KEGG: spt:SPA3237 1.9e-254 rnG; ribonuclease G K08301; COG: COG1530 Ribonucleases G and E; Psort location: Cytoplasmic, score:9.97.
 
 
 
 0.758
glmM
Hypothetical protein; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
   
 0.611
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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