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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04680Hypothetical protein. (112 aa)    
Predicted Functional Partners:
CKO_04681
Hypothetical protein; KEGG: bur:Bcep18194_A4762 1.8e-16 ABC amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: Periplasmic, score:10.00; Belongs to the bacterial solute-binding protein 3 family.
       0.773
CKO_04682
Hypothetical protein; KEGG: eca:ECA0855 1.4e-19 ABC transporter permease protein K02028; COG: COG4597 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
       0.572
CKO_04683
Hypothetical protein; KEGG: sma:SAV6546 1.1e-22 putative ABC transporter permease K02028; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
       0.572
CKO_04684
Hypothetical protein; KEGG: ecs:ECs4144 2.1e-129 putative ATP-binding component of a transport system K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
       0.572
CKO_04679
Hypothetical protein; COG: NOG14133 non supervised orthologous group.
       0.433
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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