STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04683Hypothetical protein; KEGG: sma:SAV6546 1.1e-22 putative ABC transporter permease K02028; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00. (368 aa)    
Predicted Functional Partners:
CKO_04682
Hypothetical protein; KEGG: eca:ECA0855 1.4e-19 ABC transporter permease protein K02028; COG: COG4597 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
0.997
CKO_04681
Hypothetical protein; KEGG: bur:Bcep18194_A4762 1.8e-16 ABC amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: Periplasmic, score:10.00; Belongs to the bacterial solute-binding protein 3 family.
 
 0.992
CKO_04684
Hypothetical protein; KEGG: ecs:ECs4144 2.1e-129 putative ATP-binding component of a transport system K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
  
  0.990
CKO_02511
Hypothetical protein; KEGG: eci:UTI89_C0648 1.5e-119 gltL; ATP-binding protein of glutamate/aspartate transport system K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
 
 0.876
CKO_01028
Hypothetical protein; KEGG: ssn:SSO_1201 5.8e-120 yecC; putative ATP-binding component of a transport system K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
 
 0.838
CKO_02314
Hypothetical protein; KEGG: stm:STM0828 5.2e-119 glnQ; ABC superfamily (atp_bind), glutamine high-affinity transporter K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
 
 0.832
CKO_01691
Hypothetical protein; KEGG: nma:NMA0900 1.1e-72 putative polar amino acid transport system ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
 
 0.818
CKO_02242
Hypothetical protein; KEGG: eca:ECA0855 8.0e-20 ABC transporter permease protein K02028; COG: COG4160 ABC-type arginine/histidine transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
  
  0.790
CKO_01025
Hypothetical protein; KEGG: eci:UTI89_C2121 1.1e-132 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: Periplasmic, score:10.00; Belongs to the bacterial solute-binding protein 3 family.
 
 0.784
CKO_02243
Hypothetical protein; KEGG: eci:UTI89_C2121 1.9e-27 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: Periplasmic, score:10.00; Belongs to the bacterial solute-binding protein 3 family.
 
 0.781
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.