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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04761Hypothetical protein; KEGG: shn:Shewana3_3435 1.6e-07 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.26; Belongs to the LysR transcriptional regulatory family. (312 aa)    
Predicted Functional Partners:
CKO_04760
Hypothetical protein; KEGG: pen:PSEEN0163 1.8e-187 ABC transporter, ATP-binding protein; COG: COG0488 ATPase components of ABC transporters with duplicated ATPase domains; Psort location: CytoplasmicMembrane, score:7.88.
       0.785
mdcC
Hypothetical protein; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
  
   
 0.762
CKO_04763
Hypothetical protein; KEGG: pfl:PFL_5815 7.6e-31 mdcG; phosphoribosyl-dephospho-CoA transferase; COG: NOG14034 non supervised orthologous group.
  
   
 0.761
CKO_04765
Hypothetical protein; KEGG: tko:TK1622 0.0019 methylmalonyl-CoA decarboxylase, alpha subunit K01604; COG: NOG08721 non supervised orthologous group.
  
     0.748
CKO_04769
Hypothetical protein; KEGG: reh:H16_A2718 0.00054 pct; propionate CoA-transferase K01026; COG: NOG05983 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.720
CKO_04766
Hypothetical protein; KEGG: bur:Bcep18194_A4414 1.6e-44 acetyl-CoA carboxylase beta subunit K01964; COG: COG0777 Acetyl-CoA carboxylase beta subunit; Psort location: Cytoplasmic, score:8.96.
  
     0.714
CKO_00824
Hypothetical protein; KEGG: shn:Shewana3_3435 7.1e-28 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.633
CKO_04764
Hypothetical protein; KEGG: azo:azo2534 5.6e-19 mdcF2; putative malonate transporter; COG: COG0679 Predicted permeases; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.631
mdcB
Hypothetical protein; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
  
     0.613
CKO_00385
Hypothetical protein; KEGG: shn:Shewana3_3435 2.4e-20 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.599
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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