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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04774Hypothetical protein. (58 aa)    
Predicted Functional Partners:
CKO_04775
COG: COG1765 Predicted redox protein, regulator of disulfide bond formation; Psort location: Cytoplasmic, score:8.96.
       0.773
CKO_04776
Hypothetical protein.
       0.552
CKO_04777
Hypothetical protein; KEGG: eci:UTI89_C3860 2.6e-108 crp; CRP-cAMP transcriptional dual regulator K00924; COG: COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; Psort location: Cytoplasmic, score:8.96.
       0.552
CKO_04778
KEGG: ssn:SSO_3489 0. yhfK; hypothetical protein K01823; COG: COG1289 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
       0.445
CKO_04779
Hypothetical protein; COG: COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
       0.445
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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