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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04784Hypothetical protein; COG: NOG18128 non supervised orthologous group. (55 aa)    
Predicted Functional Partners:
CKO_04783
COG: COG2184 Protein involved in cell division; Psort location: Cytoplasmic, score:8.96.
  
 
 0.988
CKO_04782
Hypothetical protein; KEGG: spt:SPA3335 4.3e-92 pabA; para-aminobenzoate synthase, glutamine amidotransferase component II K01664; COG: COG0512 Anthranilate/para-aminobenzoate synthases component II.
     
 0.712
CKO_01191
Hypothetical protein; COG: COG2719 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
   
    0.670
CKO_04785
Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.570
uspB
Hypothetical protein; COG: NOG09779 non supervised orthologous group.
   
    0.565
argD
Hypothetical protein; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
    0.513
CKO_04019
Hypothetical protein; COG: COG4575 Uncharacterized conserved protein.
   
    0.440
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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