STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04802Hypothetical protein; COG: NOG10265 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. (120 aa)    
Predicted Functional Partners:
CKO_04803
Hypothetical protein; COG: NOG06213 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
    0.815
CKO_02485
Hypothetical protein; KEGG: spt:SPA2056 0. nagE; pts system, N-acetylglucosamine-specific IIABC component K02802:K02803:K02804; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.755
CKO_05054
Hypothetical protein; KEGG: stm:STM3685 0. mtlA; PTS family, mannitol-specific enzyme IIABC components K02798:K02799:K02800; COG: COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.680
CKO_04799
Hypothetical protein; KEGG: eci:UTI89_C3877 3.2e-135 yhfV; phosphotriesterase-like protein; COG: COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold; Psort location: Cytoplasmic, score:8.96.
       0.603
CKO_04797
Hypothetical protein; COG: NOG06469 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
       0.599
CKO_04798
Hypothetical protein; COG: NOG09776 non supervised orthologous group.
       0.599
CKO_04801
Hypothetical protein; KEGG: ctc:CTC02513 0.00019 alr; alanine racemase K01775; COG: COG3457 Predicted amino acid racemase; Psort location: Cytoplasmic, score:8.96.
       0.599
CKO_04800
Hypothetical protein; KEGG: eci:UTI89_C3878 3.0e-178 yhfW; hypothetical protein YhfW K01618; COG: COG1015 Phosphopentomutase; Psort location: Cytoplasmic, score:8.96.
       0.568
CKO_00417
Hypothetical protein; KEGG: sfx:S2588 0. putative PTS system enzyme IIA component, enzyme I K02766:K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:9.97; Belongs to the PEP-utilizing enzyme family.
  
 
 0.565
CKO_03046
Hypothetical protein; KEGG: sec:SC4002 0. ptsA; general PTS family, enzyme I K02766:K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:9.97.
  
 
 0.565
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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