STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgBHypothetical protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (728 aa)    
Predicted Functional Partners:
glgA
Hypothetical protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.999
CKO_04847
Hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.998
glgX
Hypothetical protein; Removes maltotriose and maltotetraose chains that are attached by 1,6-alpha-linkage to the limit dextrin main chain, generating a debranched limit dextrin.
 
 
0.998
CKO_04837
Hypothetical protein; KEGG: eco:b3416 0. malQ; 4-alpha-glucanotransferase (amylomaltase) K00705; COG: COG1640 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score:9.97.
 
 0.996
CKO_04838
Hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.995
glgC
Hypothetical protein; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc.
 
  
 0.995
CKO_02471
Hypothetical protein; KEGG: eco:b0688 8.8e-291 pgm, blu; phosphoglucomutase K01835; COG: COG0033 Phosphoglucomutase.
  
 0.973
CKO_05029
Hypothetical protein; KEGG: eci:UTI89_C4113 0. malS; alpha-amylase precursor K01176; COG: COG0366 Glycosidases; Psort location: Periplasmic, score:10.00.
 
 
 0.958
CKO_01011
Hypothetical protein; KEGG: ecj:JW1912 4.7e-260 amyA; cytoplasmic alpha-amylase K01176; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score:9.97.
  
 
 0.942
asd
Hypothetical protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
  
 0.756
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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