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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04870Hypothetical protein; KEGG: eci:UTI89_C3956 4.0e-121 ugpQ; glycerophosphodiester phosphodiesterase, cytosolic K01126; COG: COG0584 Glycerophosphoryl diester phosphodiesterase; Psort location: Cytoplasmic, score:9.97. (249 aa)    
Predicted Functional Partners:
CKO_00538
Hypothetical protein; KEGG: spt:SPA0582 2.9e-180 glpQ; glycerophosphoryl diester phosphodiesterase periplasmic precursor K01126; COG: COG0584 Glycerophosphoryl diester phosphodiesterase; Psort location: Periplasmic, score:10.00.
     
 0.926
CKO_00166
Hypothetical protein; KEGG: ecs:ECs4755 1.8e-157 lysophospholipase L(2) K01048; COG: COG2267 Lysophospholipase; Psort location: CytoplasmicMembrane, score:9.82.
    
 0.919
CKO_00344
Hypothetical protein; COG: COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition; Psort location: CytoplasmicMembrane, score:9.82.
     
  0.900
CKO_00345
Hypothetical protein; KEGG: spt:SPA0410 3.9e-240 eutB; ethanolamine ammonia-lyase heavy chain K03735; COG: COG4303 Ethanolamine ammonia-lyase, large subunit.
     
  0.900
eutC
Hypothetical protein; KEGG: stm:STM2457 1.0e-138 eutC; ethanolamine ammonia-lyase, light chain K03736; COG: COG4302 Ethanolamine ammonia-lyase, small subunit; Psort location: Cytoplasmic, score:8.96; Belongs to the EutC family.
     
  0.900
ugpE
Hypothetical protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
  
 0.897
CKO_04873
Hypothetical protein; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.890
ugpC
Hypothetical protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
    0.830
CKO_00536
Hypothetical protein; KEGG: stm:STM2284 3.4e-282 glpA; sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit K00111; COG: COG0578 Glycerol-3-phosphate dehydrogenase; Psort location: Cytoplasmic, score:9.97; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.776
CKO_04874
Hypothetical protein; KEGG: eci:UTI89_C1581 4.0e-07 ycjN; putative ABC transporter periplasmic binding protein YcjN precursor K02027; COG: COG1653 ABC-type sugar transport system, periplasmic component; Psort location: Periplasmic, score:10.00.
 
  
 0.762
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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