STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04881Hypothetical protein. (53 aa)    
Predicted Functional Partners:
CKO_04880
Hypothetical protein; KEGG: ava:Ava_2791 0.0017 serine/threonine protein kinase K00903; COG: COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; Psort location: Periplasmic, score:10.00.
       0.531
panZ
Hypothetical protein; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family.
       0.425
CKO_04875
Hypothetical protein.
       0.418
CKO_04876
Hypothetical protein; KEGG: pen:PSEEN1282 6.2e-84 livF; branched-chain amino acid ABC transporter, ATP-binding protein; COG: COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
       0.418
CKO_04877
Hypothetical protein; KEGG: pen:PSEEN1283 1.6e-94 livG; branched-chain amino acid ABC transporter, ATP-binding protein; COG: COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
       0.418
CKO_04878
Hypothetical protein; KEGG: reh:H16_A3653 1.1e-22 ABC-type transporter, ATPase and permease components; COG: COG4177 ABC-type branched-chain amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
       0.418
CKO_04879
Hypothetical protein; KEGG: rha:RHA1_ro10323 8.5e-27 ABC branched chain amino acid transporter ATP-binding subunit; COG: COG0559 Branched-chain amino acid ABC-type transport system, permease components; Psort location: CytoplasmicMembrane, score:10.00.
       0.418
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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