STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04920Hypothetical protein; KEGG: vfi:VF0856 3.6e-17 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000; COG: NOG17954 non supervised orthologous group. (225 aa)    
Predicted Functional Partners:
CKO_04916
Hypothetical protein; KEGG: azo:azo3917 1.2e-48 glycosyltransferase; COG: COG4261 Predicted acyltransferase; Psort location: Cytoplasmic, score:8.96.
 
     0.955
CKO_04915
Hypothetical protein; KEGG: stt:t0228 0.00019 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydrase K02372; COG: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases.
 
     0.952
CKO_04918
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.952
CKO_04922
Hypothetical protein; KEGG: eca:ECA4493 2.6e-37 putative beta-hydroxydecanoyl-ACP dehydrase K01726; COG: COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase; Psort location: Cytoplasmic, score:8.96.
 
     0.952
CKO_04914
Hypothetical protein; KEGG: shn:Shewana3_0338 4.3e-53 aconitate hydratase K01680; COG: COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; Psort location: CytoplasmicMembrane, score:9.27.
 
     0.951
CKO_04919
Hypothetical protein; COG: COG4258 Predicted exporter; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.951
CKO_04913
COG: COG4648 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
 
     0.948
CKO_04917
Hypothetical protein; KEGG: vfi:VF0853 1.2e-34 esterase; COG: COG0824 Predicted thioesterase; Psort location: Cytoplasmic, score:8.96.
 
     0.942
CKO_04909
Hypothetical protein; COG: NOG16918 non supervised orthologous group.
 
     0.929
CKO_04910
Hypothetical protein; KEGG: vfi:VF0845 5.7e-58 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655; COG: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
     0.920
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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