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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_05005Hypothetical protein; KEGG: efa:EF1922 0.00037 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; COG: COG1609 Transcriptional regulators; Psort location: Cytoplasmic, score:9.97. (373 aa)    
Predicted Functional Partners:
CKO_05007
Hypothetical protein; KEGG: bur:Bcep18194_A5029 1.3e-104 sugar kinase, ribokinase family K00874; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score:9.97.
 
  
 0.774
CKO_02295
Hypothetical protein; COG: COG1609 Transcriptional regulators; Psort location: Cytoplasmic, score:9.97.
  
     0.773
CKO_05006
Hypothetical protein; COG: NOG13334 non supervised orthologous group.
 
    0.754
CKO_00417
Hypothetical protein; KEGG: sfx:S2588 0. putative PTS system enzyme IIA component, enzyme I K02766:K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:9.97; Belongs to the PEP-utilizing enzyme family.
   
 
 0.718
CKO_03046
Hypothetical protein; KEGG: sec:SC4002 0. ptsA; general PTS family, enzyme I K02766:K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:9.97.
   
 
 0.718
CKO_04620
Hypothetical protein; KEGG: sbo:SBO_3170 0. gltB; glutamate synthase, large subunit K00265; COG: COG0069 Glutamate synthase domain 2; Psort location: Cytoplasmic, score:8.96.
    
 
 0.688
CKO_05008
Hypothetical protein; KEGG: cal:orf19.2425 0.0039 highly conserved hypothetical protein K01804; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
    0.676
CKO_01210
Hypothetical protein; KEGG: dde:Dde_1180 1.9e-80 phosphoenolpyruvate-protein phosphotransferase K02766:K02768:K02784; COG: COG3412 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:9.97; Belongs to the PEP-utilizing enzyme family.
   
 
 0.669
CKO_05003
Hypothetical protein.
       0.631
CKO_05004
Hypothetical protein; KEGG: bxe:Bxe_A4171 8.0e-05 putative cytochrome c oxidase K00403; COG: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Psort location: OuterMembrane, score:10.00.
       0.631
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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