STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_05027Hypothetical protein; KEGG: lpl:lp_2645 0.00014 acm2; muramidase K01185; COG: COG2992 Uncharacterized FlgJ-related protein. (263 aa)    
Predicted Functional Partners:
CKO_01465
Hypothetical protein; KEGG: bfl:Bfl281 6.5e-05 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536; COG: NOG06285 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.624
CKO_00999
Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
 
 0.619
CKO_02858
Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
 
 0.619
CKO_01009
Hypothetical protein; COG: COG2391 Predicted transporter component; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.592
CKO_01008
COG: COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
  
     0.590
CKO_05028
Hypothetical protein.
       0.569
CKO_01489
COG: COG3238 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.552
CKO_05029
Hypothetical protein; KEGG: eci:UTI89_C4113 0. malS; alpha-amylase precursor K01176; COG: COG0366 Glycosidases; Psort location: Periplasmic, score:10.00.
       0.523
CKO_01425
Hypothetical protein; KEGG: ecp:ECP_1403 0. probable pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
    
   0.493
flgH
Hypothetical protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.449
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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