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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_05032Hypothetical protein; KEGG: tth:TTC0885 3.7e-08 acetyl-coenzyme A synthetase K01895; COG: COG1414 Transcriptional regulator. (271 aa)    
Predicted Functional Partners:
CKO_02457
Hypothetical protein; KEGG: eci:UTI89_C0709 7.1e-99 ybgJ; hypothetical protein YbgJ K01457; COG: COG2049 Allophanate hydrolase subunit 1.
  
    0.803
dlgD
Hypothetical protein; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate.
 
   
 0.683
CKO_02456
Hypothetical protein; KEGG: eci:UTI89_C0710 1.1e-148 ybgK; hypothetical protein K01941; COG: COG1984 Allophanate hydrolase subunit 2; Psort location: Cytoplasmic, score:8.96.
  
    0.661
CKO_05035
Hypothetical protein; COG: NOG11374 non supervised orthologous group.
 
     0.521
CKO_05031
Hypothetical protein; KEGG: eci:UTI89_C4115 4.7e-70 ysaA, yiaI; putative electron transport protein YsaA K00122; COG: COG1142 Fe-S-cluster-containing hydrogenase components 2; Psort location: Cytoplasmic, score:9.97.
       0.507
CKO_05034
Hypothetical protein; COG: COG2731 Beta-galactosidase, beta subunit; Psort location: Cytoplasmic, score:8.96.
     
 0.483
CKO_03107
Hypothetical protein; KEGG: psp:PSPPH_2917 9.5e-09 DNA-binding protein K00517; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
 
  
 0.471
CKO_01570
Hypothetical protein; KEGG: msm:MSMEG_3400 1.9e-07 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; COG: COG1802 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
  
  
 0.465
CKO_05036
Hypothetical protein; KEGG: cal:orf19.2425 0.0038 highly conserved hypothetical protein K01804; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.462
CKO_03396
Hypothetical protein; KEGG: stm:STM4580.S 1.5e-217 nadR; nicotinamide-nucleotide adenylyltransferase K00952:K06210:K06211; COG: COG3172 Predicted ATPase/kinase involved in NAD metabolism; Psort location: Cytoplasmic, score:8.96.
   
  
 0.431
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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