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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_05035Hypothetical protein; COG: NOG11374 non supervised orthologous group. (309 aa)    
Predicted Functional Partners:
CKO_00635
Hypothetical protein; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
  
     0.768
dlgD
Hypothetical protein; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate.
 
     0.760
CKO_05034
Hypothetical protein; COG: COG2731 Beta-galactosidase, beta subunit; Psort location: Cytoplasmic, score:8.96.
 
     0.757
nth
Hypothetical protein; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
  
 
 0.730
CKO_04793
Hypothetical protein; KEGG: eci:UTI89_C1627 0. entS; EntS/YbdA MFS transporter; COG: COG5295 Autotransporter adhesin.
  
     0.729
CKO_02607
Hypothetical protein; KEGG: dre:562769 1.9e-06 LOC562769; similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) K08837; COG: COG1076 DnaJ-domain-containing proteins 1; Psort location: Cytoplasmic, score:8.96.
  
    0.725
CKO_01777
Hypothetical protein; KEGG: sdy:SDY_1527 3.9e-137 xthA; exonuclease III K01142; COG: COG0708 Exonuclease III; Psort location: Cytoplasmic, score:9.97.
    
 
 0.724
CKO_02623
COG: COG3539 P pilus assembly protein, pilin FimA; Psort location: Extracellular, score:9.72.
  
     0.684
CKO_03472
Hypothetical protein; KEGG: chu:CHU_1556 4.2e-11 DNA helicase K01529; COG: COG1112 Superfamily I DNA and RNA helicases and helicase subunits.
  
  
 0.681
CKO_04382
Hypothetical protein; COG: COG0725 ABC-type molybdate transport system, periplasmic component.
 
     0.644
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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