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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_05036Hypothetical protein; KEGG: cal:orf19.2425 0.0038 highly conserved hypothetical protein K01804; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00. (407 aa)    
Predicted Functional Partners:
CKO_04160
Hypothetical protein; COG: COG0738 Fucose permease; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.630
CKO_05040
Hypothetical protein; KEGG: ecp:ECP_3687 5.0e-146 putative hexulose-6-phosphate isomerase K03082; COG: COG3623 Putative L-xylulose-5-phosphate 3-epimerase.
 
     0.600
CKO_05041
Hypothetical protein; KEGG: sty:STY4119 2.5e-119 yiaS, sgbE; putative sugar isomerase K03080; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
       0.548
CKO_05039
Hypothetical protein; KEGG: stm:STM3675 1.1e-107 sgbH; putative 3-hexulose-6-phosphate isomerase K03081; COG: COG0269 3-hexulose-6-phosphate synthase and related proteins; Psort location: Cytoplasmic, score:8.96.
       0.544
nanA
Hypothetical protein; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate.
  
  
 0.539
CKO_05139
Hypothetical protein; KEGG: rpc:RPC_4382 3.3e-78 dihydrodipicolinate synthetase K01714; COG: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Psort location: Cytoplasmic, score:8.96.
  
  
 0.539
CKO_05037
Hypothetical protein; KEGG: stm:STM3674 5.5e-234 lyxK; L-xylulose kinase K00880; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score:8.96.
       0.538
dlgD
Hypothetical protein; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate.
 
    0.492
CKO_05032
Hypothetical protein; KEGG: tth:TTC0885 3.7e-08 acetyl-coenzyme A synthetase K01895; COG: COG1414 Transcriptional regulator.
 
  
 0.462
CKO_05035
Hypothetical protein; COG: NOG11374 non supervised orthologous group.
       0.443
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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