STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_05086Hypothetical protein; KEGG: sbo:SBO_3630 2.5e-71 waaJ; lipopolysaccharide 1,2-glucosyltransferase K03279; COG: COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; Psort location: Cytoplasmic, score:8.96. (339 aa)    
Predicted Functional Partners:
CKO_05087
Hypothetical protein; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
 
 0.983
CKO_05089
Hypothetical protein; KEGG: ecc:c4455 4.1e-142 rfaG; lipopolysaccharide core biosynthesis protein rfaG K02844; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score:8.96.
 
 
 0.977
CKO_05085
Hypothetical protein; KEGG: eca:ECA0157 2.8e-79 waaJ, rfaJ; lipopolysaccharide 1,2-glucosyltransferase K03279; COG: COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases.
 
  
 
0.965
CKO_05090
Hypothetical protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
 
  
 0.945
CKO_05075
Hypothetical protein; KEGG: ssn:SSO_3780 8.9e-21 waaY; lipopolysaccharide core biosynthesis K02850; COG: NOG10262 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
   
 
 0.931
CKO_05081
Hypothetical protein; KEGG: ecj:JW3597 8.2e-50 rfaL; O-antigen ligase K02847; COG: COG3307 Lipid A core - O-antigen ligase and related enzymes; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.928
CKO_05083
Hypothetical protein; KEGG: eca:ECA0160 1.8e-86 waaQ, rfaQ; lipopolysaccharide core biosynthesis glycosyl transferase rfaq K02849; COG: COG0859 ADP-heptose:LPS heptosyltransferase.
  
 
 0.919
CKO_05080
Hypothetical protein; KEGG: sbo:SBO_3626 3.3e-140 rfaC; heptosyl transferase I K02841; COG: COG0859 ADP-heptose:LPS heptosyltransferase.
  
 
 0.916
CKO_05079
Hypothetical protein; KEGG: ecp:ECP_3720 3.3e-181 ADP-heptose-LPS heptosyltransferase II K02843; COG: COG0859 ADP-heptose:LPS heptosyltransferase.
  
 
 0.913
CKO_03039
Hypothetical protein; KEGG: pha:PSHAa2772 3.1e-21 eptA; lipid A phosphoethanolamine transferase, associated with polymyxin resistance K03760; COG: COG2194 Predicted membrane-associated, metal-dependent hydrolase; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.535
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.