Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AAur_0323 | AAur_0453 | Putative CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | Hypothetical protein; Identified by Glimmer2; putative. | 0.413 |
AAur_0323 | AAur_0456 | Putative CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | Hypothetical protein; Identified by Glimmer2; putative. | 0.428 |
AAur_0323 | AAur_2831 | Putative CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | Putative integral membrane protein. | 0.458 |
AAur_0323 | AAur_3262 | Putative CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | Conserved hypothetical protein. | 0.653 |
AAur_0323 | AAur_3344 | Putative CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | Hypothetical protein; Identified by Glimmer2; putative. | 0.453 |
AAur_0323 | AAur_3946 | Putative CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | Putative major facilitator superfamily (MFS) transporter; Identified by match to protein family HMM PF07690. | 0.406 |
AAur_0453 | AAur_0323 | Hypothetical protein; Identified by Glimmer2; putative. | Putative CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | 0.413 |
AAur_0453 | AAur_0456 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.891 |
AAur_0456 | AAur_0323 | Hypothetical protein; Identified by Glimmer2; putative. | Putative CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | 0.428 |
AAur_0456 | AAur_0453 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.891 |
AAur_2831 | AAur_0323 | Putative integral membrane protein. | Putative CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | 0.458 |
AAur_2831 | AAur_3262 | Putative integral membrane protein. | Conserved hypothetical protein. | 0.441 |
AAur_3262 | AAur_0323 | Conserved hypothetical protein. | Putative CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | 0.653 |
AAur_3262 | AAur_2831 | Conserved hypothetical protein. | Putative integral membrane protein. | 0.441 |
AAur_3344 | AAur_0323 | Hypothetical protein; Identified by Glimmer2; putative. | Putative CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | 0.453 |
AAur_3946 | AAur_0323 | Putative major facilitator superfamily (MFS) transporter; Identified by match to protein family HMM PF07690. | Putative CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | 0.406 |